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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891019.1_cds_XP_016445715.1_40649
CDS Infomation

[gene=LOC107770900] [db_xref=GeneID:107770900] [protein=alpha-galactosidase 1-like] [protein_id=XP_016445715.1] [location=join(2561..2603,2744..2781,2887..2990,3079..3154,3242..3300,3408..3473,7340..7423,7500..7564,7634..7716,7819..7909,8374..8564,9008..9100)] [gbkey=CDS]
Sequence

ATGTGTTCGAAAAATTCATTAAATATCTATAAATATGTGAATGTAGATGATTGTTGGGCT
GAACCTCAACGCGACGATCAGGGAAATCTTGCACCTAAAAAGTCCACATTTCCTTCTGGA
ATGAAAGCTGTAGCTGACTATGTTCACAGTAAAGGTCTTAAGCTAGGAATCTACTCAGAT
GCAGGGTATTATACTTGCAGCAGAAAAATGCCTGGTTCACTTGGTCATGAGGAACAAGAT
GCAAAAACTTTTGCAGCATGGGGTATTGATTATTTGAAGTATGATAACTGCAACCATGAT
GGAACAAAGCCAACTGCGCGATATCCTGTAATGACAAGAGCTCTAATGAACGCTGGACGG
CCAATCTTCTTTAGTCTTTGTGAATGGGGCGACTTGCATCCAGCGTTGTGGGGTGGTAAA
GTAGGTAACAGCTGGAGAAACACGATCGATATTCAGGATAAATGGGAAAGCATGATTTTG
CGAGCAGACCAGAATGAAGTTTATGCAGACCTTGCGCGACCTGGTGGTTGGAATGATCCT
GATATGCTTGAGGTGGGAAATGGAGGGATGACAAAGGATGAATACATTGTCCACTTTAGC
CTCTGGGCTATTTCAAAGGCTCCCCTTATCATCGGTTGTGATGTGAGAAACTTATCAAAT
GATACCAAAGAAATACTTGCCAACAAAGAGGTCATTGATGTGAACCAAGATAAATTAGGT
ATCCAGGGCAAAAAGGTTAGAATGCAAGGCGATCTCGAGGTGTGGGCAGGGCCTCTATCA
GGCTATAGAGTAGCTCTAGTGCTTCTCAACCGCGACTCTACTAAAATAGAAATGACAGTT
CTCTGGGAAGATATTTGCATCCCTCCTAACAGTCTTGTAGAAGCAAGAGATCTTTGGGAG
CACAAGACATTGAAGACAAGATTTGAAGGGAATTTGACAGCAACAGTGAACTCTCATGCA
TGCAAGATGTATGTATTGAAGCCTACTGCTTGA

Peptide Sequence

PEP ID

XP_016445715.1
PEP Infomation

PREDICTED: alpha-galactosidase 1-like [Nicotiana tabacum]
Sequence

MCSKNSLNIYKYVNVDDCWAEPQRDDQGNLAPKKSTFPSGMKAVADYVHSKGLKLGIYSD
AGYYTCSRKMPGSLGHEEQDAKTFAAWGIDYLKYDNCNHDGTKPTARYPVMTRALMNAGR
PIFFSLCEWGDLHPALWGGKVGNSWRNTIDIQDKWESMILRADQNEVYADLARPGGWNDP
DMLEVGNGGMTKDEYIVHFSLWAISKAPLIIGCDVRNLSNDTKEILANKEVIDVNQDKLG
IQGKKVRMQGDLEVWAGPLSGYRVALVLLNRDSTKIEMTVLWEDICIPPNSLVEARDLWE
HKTLKTRFEGNLTATVNSHACKMYVLKPTA

Transcript Sequence

Gene sequence data has not been registered.